Bioinformatics Tools |
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AMUSER | Designing optimal primers for USER fusion. | 为USER融合设计最佳引物。 |
BioReader | Biomedical Research Article Distiller | 生物医学研究文章蒸馏器 |
Blast2logo | Generation of sequence-profile logos using PSI-blast. | 使用PSI blast生成序列配置文件徽标。 |
CMG-biotools | Comparative Microbial Genomics biotools | 比较微生物基因组学生物工具 |
EasyGibbs | Motif recognition in protein sequences by Gibbs sampler. | 吉布斯采样器在蛋白质序列中的基序识别。 |
EasyPred | Development of neural network and weight matrix prediction methods for protein sequences. | 蛋白质序列的神经网络和权重矩阵预测方法的发展。 |
FeatureExtract | Extraction of sequence and annotation, e.g. intron/exon structure, from GenBank format files | 从GenBank格式文件中提取序列和注释,例如内含子/外显子结构 |
GibbsCluster | Simultaneous alignment and clustering of peptide data | 肽数据的同时比对和聚类 |
MHCMotifViewer | Easy browsing and visualisation of MHC class I and II binding motifs. | MHC I类和II类结合图案的轻松浏览和可视化。 |
MatrixPlot | Visualizing structural sequence constraints. | 可视化结构序列约束。 |
MaxAlign |
| 通过在比对中选择序列的最优子集来最大化无间隙列的大小。 |
RedHom | Reduction of sequence similarity in a data set | 数据集中序列相似性的减少 |
RevTrans | Multiple alignment of coding DNA using protein level information | 利用蛋白质水平信息对编码DNA进行多重比对 |
Seq2Logo | Sequence logo generator | 序列徽标生成器 |
TreeHugger | Constructing NJ trees from DNA and Protein alignments. | 从DNA和蛋白质比对构建NJ树。 |
VirtualRibosome | A comprehensive tool for translating DNA sequences to the corresponding peptide sequences. | 一种将DNA序列翻译成相应肽序列的综合工具。 |
Jetset | Selecting an optimal microarray probe set to represent a gene | 选择代表基因的最佳微阵列探针集 |
Datasets |
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AraClean | Arabidopsis thaliana data set | 拟南芥数据集 |
CellCycle | Cell cycle related data sets and supplementary information | 与细胞周期相关的数据集和补充信息 |
DNA2protSS | mRNA sequences and the corresponding protein secondary structure assignments | 信使核糖核酸序列和相应的蛋白质二级结构分配 |
DOGS | Database Of Genome Sizes | 基因组大小数据库 |
GlycateBase | Database of glycation data for ε amino groups of lysines | 赖氨酸ε氨基的糖化数据数据库 |
MetaGenomic Species | Information on metagenomic species (MGS)and co-abundance gene groups (CAGs) of the human gut | 关于人类肠道宏基因组物种(MGS)和共丰度基因组(CAGs)的信息 |
NESbase | Database of nuclear export signals | 核出口信号数据库 |
NetStart | Translation initiation site data sets | 翻译起始站点数据集 |
OglycBase | Database of O-glycosylated proteins | O-糖基化蛋白数据库 |
Phosphobase | Database of phosphorylation sites, has moved to EMBL | 磷酸化位点数据库已移至EMBL |
PlantExpr | Supplementary plant gene expression data for scientific publications | 科学出版物的补充植物基因表达数据 |
SignalP datasets | Signal peptide data sets | 信号肽数据集 |
质粒图谱 | https://www.snapgene.com/ |
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蛋白信息 | https://www.uniprot.org/ |
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